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standard rnaseq analysis pipeline  (GeneLAB GmbH)

 
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    GeneLAB GmbH standard rnaseq analysis pipeline
    Standard Rnaseq Analysis Pipeline, supplied by GeneLAB GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/result/standard rnaseq analysis pipeline/product/GeneLAB GmbH
    Average 90 stars, based on 1 article reviews
    standard rnaseq analysis pipeline - by Bioz Stars, 2026-06
    90/100 stars

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    Counts per million (CPM) for the indicated transcripts from the RNAseq analysis in . ****=p<0.00001; ***=p<0.0001; **=p<0.001; *=p<0.05. Only significant comparisons are shown. Statistical tests are described in the methods.

    Journal: bioRxiv

    Article Title: ATF4 and EcR interact to mediate both transcriptional activation and repression in the Drosophila fat body

    doi: 10.64898/2026.03.10.710866

    Figure Lengend Snippet: Counts per million (CPM) for the indicated transcripts from the RNAseq analysis in . ****=p<0.00001; ***=p<0.0001; **=p<0.001; *=p<0.05. Only significant comparisons are shown. Statistical tests are described in the methods.

    Article Snippet: Duplicate RNA samples from independent crosses were submitted for each genotype to the Plasmidsaurus RNAseq analysis pipeline.

    Techniques: RNA sequencing

    A) Table summarizing the overall count of differentially regulated genes in RNAseq analyses performed in isolated fat bodies where the indicated RNAi lines are driven by Dcg-GAL4 . B) Venn-diagram showing the commonalities in the differentially downregulated (left) and upregulated genes (right) in A. C-E) Counts per million (CPM) for the indicated transcripts from the RNAseq analysis in A . C and D show data for known EcR targets, E shows data for known ATF4 targets. Also see Table S1 and S2 . ****=p<0.00001; ***=p<0.0001; **=p<0.001; *=p<0.05. Only significant comparisons are shown. Statistical tests are described in the methods.

    Journal: bioRxiv

    Article Title: ATF4 and EcR interact to mediate both transcriptional activation and repression in the Drosophila fat body

    doi: 10.64898/2026.03.10.710866

    Figure Lengend Snippet: A) Table summarizing the overall count of differentially regulated genes in RNAseq analyses performed in isolated fat bodies where the indicated RNAi lines are driven by Dcg-GAL4 . B) Venn-diagram showing the commonalities in the differentially downregulated (left) and upregulated genes (right) in A. C-E) Counts per million (CPM) for the indicated transcripts from the RNAseq analysis in A . C and D show data for known EcR targets, E shows data for known ATF4 targets. Also see Table S1 and S2 . ****=p<0.00001; ***=p<0.0001; **=p<0.001; *=p<0.05. Only significant comparisons are shown. Statistical tests are described in the methods.

    Article Snippet: Duplicate RNA samples from independent crosses were submitted for each genotype to the Plasmidsaurus RNAseq analysis pipeline.

    Techniques: RNA sequencing, Isolation